Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798578.1_cds_XP_016461051.1_5411
CDS Infomation

[gene=LOC107784425] [db_xref=GeneID:107784425] [protein=uncharacterized protein LOC107784425 isoform X2] [protein_id=XP_016461051.1] [location=complement(join(3676..3984,4244..4336,4413..4619,5851..6098,6187..6502,8309..8384,8471..9378))] [gbkey=CDS]
Sequence

ATGCACCTTGAGAAGGACATATGTGATAATATTTTGGGGACACTCTTGAATATCAAAGGA
AAAACCAAAGACACCATAAAAACTCAGCTAGATTTGCAAGCGATGAATATAAGGAAAGAA
TTGTATCCAATAAAAAATGGGGATAAATATGACTTACCAACGGCATGTTACACATTATCT
CCAGAAGAGAAGTACAAGTTTTGCGATTTCTTAAACAATCTGAAGGTCCCGGATGGATTT
TCATCAAACATTTCTCAGTGTGTCAACCTTAAGGATCGTAAAATTTCAGGCTTAAAAAGT
CATGATTGCCATATTATTCTACAATATGTACTCCCACTTGCGATATGTGGAATGCTTTAC
AAATCTGTGAGTGAACCACTTATTGAGTTATCTTTATTTTTCATCATTCTTGGAGCGAAA
TGTTTAAGCATGGAAGAATTAGAACAAATTGATTGCCAAATTTCGAAAACCAAGTGCAAG
TTAGAAAATGTATTCCCTCCTATTTTTTTTGATGTCATGGAGCACTTGCCAATTCATTTA
GCTAATGAAGCTAAGATTGCTGGACCTACTCAATATCGGCATATGTATCCAATGGAGCGA
TACATATACTTTATGAAGTCTTTAGTTGGTAATAGGGCTTGCCCAGAAGGTTCTATTGCA
GAGGGGTATTTAGCAACTGAATGTTTGACCTTATGTTCAAGGTATTTGCATACAATGGAA
ATAAAATTTAATCGCTTTGAACGGAATTGTGATGGTGGTGTTGTAGAATGTGATGGAGGT
TTAACAATTTTTTGTGAACCTGGAAGAGCTTTAAGAGGTGGCAAACCATGCAGATTTGAT
TCATATGAATTTGAGCAAGCACATATTTATATTTTAAAGAACTGTGATGGAGTTCAACCA
TTTCTCGAAGAGATTTCACAAACTCCAGCTAATAACTCTCAAGAAACTTCGGATCGGCAA
TTCATTAGTTGGTTAAAAGAAAAGGTTGAGATGAATCCATCAAAATCTGAGAAGTTTGAA
ATGGAATCAACTTCAAAGACTGTTAAGCATTCATTTGTTGCAACTGGCGCCTTAGCAAGG
GGACGAGGGCAAAGCTTCAGAACTTTGGATTCAGTAAGAGTAAATGCTGAAAAGAGACTC
CCGATTGGCAAAAGTAAAAATCGTAATGCAGCAGCTTCTTATCTGAACGAACTAGCTCAG
AATAAGAGTCTTGCACCTCCTAGTTTTGATCCACTAGAAGATGATGTTTCCCTCCCGCAA
GAAGTTGAAGTGATGCAAGACACTCAGAGAAACGAAATAAGTCCATGTGAATCTGAAAAG
GCAAAAAAAGTGAGAGGAAAGAACAGGTGTAAAAATGTTCTAGGACTGAAAGTTGAAAAA
ATGTTGAGCGTCACTTTCTACCAGAATCGAGTTGTTGGGAAGAATTCAACCTCATTTGTG
AGACACTTAGGTATATTAGTTCGTGACCGTAATAAGTGCCCACTGCGCGTTCACTCATGG
GCGGACATCGAAGAATATAAGCTGGACCATATGTGGGAAGTTGTTACTGACAAATTTGAT
AGTGCTGACATAAATTGTCAAAGAGATAATGTCTTGAAACATATGAGAAGGTTATGGAAC
AATTGGAGAGGATCGCTTCACTTGATTGTGAAGTCTAAGTCATTGCGCGACGTTCTAAAG
GATGTGCCAGAGGGGGTCGACAAGAGTGATTGGGAATGGTTGGTCAAGGAGCACTTTTTA
TCTGAAAAGTTTAAGGAAAGAAGTATGAGAAACTCAGTGAATAAGTCTAAGTTGATTATG
CCTCATTGTACGGGCAACAAGCCTATCAGAGAAATTATTTACGAGCTGGCCGAAATTCAA
GAACTGATACAATCCGAGCCGTCTCTTATAAATATTGAGGTTGTAGAAAGATGTTTTGGA
CCTCAATGCAAGAGCAATGTGGTTGGATTTAGGGGTGAAACAACCGCTAAGGAGTTAAAA
GGTGGTAATTCCTCTAAGGCTACACTGTTGGATGAGTTGAATGCAACTCGAAAAGAAAAT
CTTTCACTAAAAAGACGTCTGGATAACTTGGAGAATACAGTTGCACAACTTGCAAGCATA
TACTCTTGTCAGCCTTCATCAACACCATCTTCAACTGAACCAGATACATGCATCTGA

Peptide Sequence

PEP ID

XP_016461051.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107784425 isoform X2 [Nicotiana tabacum]
Sequence

MHLEKDICDNILGTLLNIKGKTKDTIKTQLDLQAMNIRKELYPIKNGDKYDLPTACYTLS
PEEKYKFCDFLNNLKVPDGFSSNISQCVNLKDRKISGLKSHDCHIILQYVLPLAICGMLY
KSVSEPLIELSLFFIILGAKCLSMEELEQIDCQISKTKCKLENVFPPIFFDVMEHLPIHL
ANEAKIAGPTQYRHMYPMERYIYFMKSLVGNRACPEGSIAEGYLATECLTLCSRYLHTME
IKFNRFERNCDGGVVECDGGLTIFCEPGRALRGGKPCRFDSYEFEQAHIYILKNCDGVQP
FLEEISQTPANNSQETSDRQFISWLKEKVEMNPSKSEKFEMESTSKTVKHSFVATGALAR
GRGQSFRTLDSVRVNAEKRLPIGKSKNRNAAASYLNELAQNKSLAPPSFDPLEDDVSLPQ
EVEVMQDTQRNEISPCESEKAKKVRGKNRCKNVLGLKVEKMLSVTFYQNRVVGKNSTSFV
RHLGILVRDRNKCPLRVHSWADIEEYKLDHMWEVVTDKFDSADINCQRDNVLKHMRRLWN
NWRGSLHLIVKSKSLRDVLKDVPEGVDKSDWEWLVKEHFLSEKFKERSMRNSVNKSKLIM
PHCTGNKPIREIIYELAEIQELIQSEPSLINIEVVERCFGPQCKSNVVGFRGETTAKELK
GGNSSKATLLDELNATRKENLSLKRRLDNLENTVAQLASIYSCQPSSTPSSTEPDTCI

Transcript Sequence

Gene sequence data has not been registered.